BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031A05LP1|AL429316
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig693 1760 0.0
>3x_Contig693
Length = 3563
Score = 1760 bits (885), Expect = 0.0
Identities = 890/893 (99%)
Strand = Plus / Minus
Query: 11 ttcggagagaatattcggtccaggtcgttgttcaggagaaacgcaggcgagacgcaggaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 ttcggagagaatattcggtccaggtcgttgttcaggagaaacgcaggcgagacgcaggaa 901
Query: 71 gagcgcatgattagaggcgcatacgttggaaaattataccctggccgagttaaagcagat 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 gagcgcatgattagaggcgcatacgttggaaaattataccctggccgagttaaagcagat 841
Query: 131 gtggatgagaaacaaggactctcactttcattcgatgaaaagactggagaactcgtagtg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gtggatgagaaacaaggactctcactttcattcgatgaaaagactggagaactcgtagtg 781
Query: 191 gagcctaatacgacatggtgcgacaaggatacgctagtyagaattcattcggagtgttac 250
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 780 gagcctaatacgacatggtgcgacaaggatacgctagtcagaattcattcggagtgttac 721
Query: 251 actggagaaacggcgtggagtgcgaggtgtgattgtggggaacaattcgatagagcaggg 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 actggagaaacggcgtggagtgcgaggtgtgattgtggggaacaattcgatagagcaggg 661
Query: 311 aaactgatctctgtggaacgtgagggtgatatcgttggaggcaacggccatggtgtaatc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aaactgatctctgtggaacgtgagggtgatatcgttggaggcaacggccatggtgtaatc 601
Query: 371 gtatatttwagacaagagggccggggtattgggctcggagagaaattaaaggcttacaat 430
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtatatttaagacaagagggccggggtattgggctcggagagaaattaaaggcttacaat 541
Query: 431 ttacaggaccttggtgcagacacagtgcaggccaacttgctgttaaaacatccagcagat 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttacaggaccttggtgcagacacagtgcaggccaacttgctgttaaaacatccagcagat 481
Query: 491 ggtcgggatttctccataggtagggcaatactaatcgatttggggatctcaaacgtcaga 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggtcgggatttctccataggtagggcaatactaatcgatttggggatctcaaacgtcaga 421
Query: 551 ttacttacgaacaacccggataaagtagcacaagtggaacaggcgccatatctactttgc 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 420 ttacttacgaacaacccggataaagtagcacaagtggaacaggcgccatatctacattgc 361
Query: 611 gtcgagcgtgttccaatggtacccttgtcgtggtctggtaaccataaggatgggatccat 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gtcgagcgtgttccaatggtacccttgtcgtggtctggtaaccataaggatgggatccat 301
Query: 671 tcaaaggaaatagaaggctatttgagaacaaaaatcgaaagaatgggccatctcttacaa 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcaaaggaaatagaaggctatttgagaacaaaaatcgaaagaatgggccatctcttacaa 241
Query: 731 aaaccattaacgctacatacaaataatgatacaaaccaccaatctactcctattgcctga 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aaaccattaacgctacatacaaataatgatacaaaccaccaatctactcctattgcctga 181
Query: 791 ggttttgaggaaacctaaatacaacacacatagtataccacatattaataagttttccaa 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ggttttgaggaaacctaaatacaacacacatagtataccacatattaataagttttccaa 121
Query: 851 tcagaaagtacattaaaataaaaaaccttgtacacacgtacatgtatatatat 903
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tcagaaagtacattaaaataaaaaaccttgtacacacgtacatgtatatatat 68
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5303
Number of Sequences: 1807
Number of extensions: 5303
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)